PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC038428.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 91aa    MW: 10273.5 Da    PI: 8.5499
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC038428.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH223e-0720591554
                  HHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
           HLH 15 riNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                  +i +  ++L++llP+ + + +s K+s a +L++++++I+sL
  EcC038428.10 20 QIIDLVSKLQQLLPEiR-NRRSDKVSAAKVLQETCNHIRSL 59
                  56677799*******77.89*******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.451559IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-72073IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-42059IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.84E-82376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
MSSRRSRSRQ SGSSGISDDQ IIDLVSKLQQ LLPEIRNRRS DKVSAAKVLQ ETCNHIRSLH  60
REVDDLSERL SELLANSDSD QAAVIRNLLM Q
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010037162.14e-57PREDICTED: transcription factor PRE3-like
SwissprotF4JCN96e-37PRE4_ARATH; Transcription factor PRE4
TrEMBLA0A059A4U44e-57A0A059A4U4_EUCGR; Uncharacterized protein
STRINGGLYMA04G34080.18e-40(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM25928225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.15e-33activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1